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Commit 7b06ae5b authored by Nicolas Richart's avatar Nicolas Richart
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Move definitions around, removes what does not compile

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......@@ -105,7 +105,6 @@ definitions:
# Python packages
# -------------------------------------------------------------------------
- python_codes:
- bedtools2
- bowtie2
- cairo
- mercurial
......@@ -129,7 +128,6 @@ definitions:
- py-pip
- py-platformdirs
- py-ply
- py-protobuf
- py-pybind11
- py-pyparsing
- py-python-dateutil
......@@ -147,22 +145,8 @@ definitions:
- scons
- snakemake
- python_blas_codes:
- boost ~~mpi
#- gmsh ~~mpi +hdf5 +cgns +eigen ~opencascade +openmp ~fltk ~med
- iq-tree
- py-biopython
- py-keras-preprocessing
- py-macs3
- py-matplotlib
- py-numpy
- py-opt-einsum
- py-pandas
- py-pybigwig
- py-xarray
- valgrind ~~mpi
- gcc_python_codes:
- bedtools2
- blast-plus
- cistem ^fftw ~~mpi
- ctffind ^fftw ~~mpi
......@@ -173,9 +157,23 @@ definitions:
- mesa
- mummer
- node-js
- py-protobuf
- rust
- spades
- python_blas_codes:
- boost ~~mpi
#- gmsh ~~mpi +hdf5 +cgns +eigen ~opencascade +openmp ~fltk ~med
- iq-tree
- py-biopython
- py-keras-preprocessing
- py-numpy
- py-opt-einsum
- py-pandas
- py-pybigwig
- py-xarray
- valgrind ~~mpi
- gcc_python_blas_codes:
- caffe +python ^hdf5 ~mpi
- gdb +tui +source-highlight +xz
......@@ -184,6 +182,8 @@ definitions:
- py-cryolobm
- py-deeptools
- py-h5py ~~mpi
- py-macs3
- py-matplotlib
- py-pymol ^hdf5~mpi
- py-scikit-learn
- py-scipy
......@@ -225,7 +225,6 @@ definitions:
- arpack-ng ++mpi
- hypre@2.31.0
- mumps@5.6.2
- quantum-espresso
- superlu-dist@8.2.1
- gcc_mpi_blas_codes:
......@@ -235,10 +234,14 @@ definitions:
# - elmerfem +mumps +openmp +hypre
- hpl
- netlib-scalapack
- quantum-espresso
# - trilinos
# - vtk
# - yambo ++mpi io=iotk,etsf-io
- nvhpc_mpi_blas_codes:
- quantum-espresso
- mpi_blas_python_codes:
- petsc
- slepc
......
......@@ -79,6 +79,12 @@ spack:
- [$^mpi_nvhpc]
- [$%compiler_nvhpc]
- matrix:
- [$nvhpc_mpi_blas_codes]
- [$^blas_nvhpc]
- [$^mpi_nvhpc]
- [$%compiler_nvhpc]
- matrix:
- [$mpi_blas_python_codes]
- [$^blas_nvhpc]
......
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