diff --git a/algos/RAPDENSobs/.gitignore b/algos/RAPDENSobs/.gitignore
deleted file mode 100644
index 27b8ecde3f5587d757b18322acda03f94558ff64..0000000000000000000000000000000000000000
--- a/algos/RAPDENSobs/.gitignore
+++ /dev/null
@@ -1 +0,0 @@
-*.sldd
diff --git a/algos/RAPTORobs/.gitignore b/algos/RAPTORobs/.gitignore
deleted file mode 100644
index 27b8ecde3f5587d757b18322acda03f94558ff64..0000000000000000000000000000000000000000
--- a/algos/RAPTORobs/.gitignore
+++ /dev/null
@@ -1 +0,0 @@
-*.sldd
diff --git a/algos/SCDalgo_template/SCDalgo_template.slx b/algos/SCDalgo_template/SCDalgo_template.slx
deleted file mode 100644
index 03946e08b3e5f717be9d8a6d43cdc132ef82eff0..0000000000000000000000000000000000000000
Binary files a/algos/SCDalgo_template/SCDalgo_template.slx and /dev/null differ
diff --git a/algos/SCDalgo_template/SCDalgo_template_harness_run.m b/algos/SCDalgo_template/SCDalgo_template_harness_run.m
deleted file mode 100644
index e24e436422b44ab76c101f74c3633ba651251df2..0000000000000000000000000000000000000000
--- a/algos/SCDalgo_template/SCDalgo_template_harness_run.m
+++ /dev/null
@@ -1,58 +0,0 @@
-function SCDalgo_template_harness_run(obj)
-% run harness and check the result
-
-% load tunable control parameters from mds
-shot = 100; % shot reference
-obj.actualizeparameters(shot);
-
-% Input Data - must be structure of timeseries matching input bus structure
-time = 0:obj.gettiming.dt:1;
-data = single(sin(2*pi*time*10)');
-% NB: these struct name and types must match the corresponding data bus
-tsStructData = struct('simple_signal',timeseries(data,time,'Name','Test Input Data'));
-
-% SimIn object to customize configuration of Simulation run for test
-SimIn = Simulink.SimulationInput(obj.getname);
-
-% Create template Input dataset for this model
-Dataset = createInputDataset(obj.getname);
-
-% assign input data signal to Simulink.Signal object
-DataIn = Simulink.SimulationData.Signal;
-DataIn.Values = tsStructData;
-
-% assign as first element in input data set
-isig = find(contains(Dataset.getElementNames,'signal_in')); % find input signal index
-Dataset = Dataset.setElement(isig,DataIn); %#ok<FNDSB>
-SimIn.ExternalInput = Dataset; % assign this as external input for simulation
-
-% Custom parameters for this run to save outport data
-SimIn = SimIn.setModelParameter('SaveOutput','on'); % set to save outport signals
-SimIn = SimIn.setModelParameter('SignalLogging','on'); % set to save log signals
-SimIn = SimIn.setModelParameter('OutputSaveName','SimOut');
-SimIn = SimIn.setModelParameter('SaveFormat','Dataset');
-SimIn = SimIn.setModelParameter('StartTime',num2str(time(1)));
-SimIn = SimIn.setModelParameter('StopTime',num2str(time(end)));
-SimIn = SimIn.setModelParameter('FixedStep',num2str(mean(diff(time))));
-
-% simulate - simulate only single types to save time
-result = sim(SimIn);
-
-% check output port data
-tp = SCDalgo_template_loadtp;
-output = result.SimOut{1}.Values.SCDsignal_example_3.Value;
-assert(max(output) == 7,'Wrong output!');
-
-% check logs which contain a SCDsignal type data
-logsout = result.logsout;
-
-signal    = logsout.getElement('SCDsignal type bus').Values.Value;
-Quality   = logsout.getElement('SCDsignal type bus').Values.QualityTag;
-State     = logsout.getElement('SCDsignal type bus').Values.ProductionState;
-
-assert(all(signal.Data(:,1) == tp.gain*tsStructData.simple_signal.Data),...
-  'Logged signal does not match input!');
-
-assert(all(State  .Data == ProductionState.RUNNING),'ProductionState must be RUNNING');
-assert(all(Quality.Data == QualityTag.GOOD        ),'QualityTag must be RUNNING'     );
-end
diff --git a/algos/SCDalgo_template/SCDalgo_template_inBus_def.m b/algos/SCDalgo_template/SCDalgo_template_inBus_def.m
deleted file mode 100644
index b92922ad302308e7c7dafb19d5ed8f1782dc9ed9..0000000000000000000000000000000000000000
--- a/algos/SCDalgo_template/SCDalgo_template_inBus_def.m
+++ /dev/null
@@ -1,21 +0,0 @@
-% Bus object: SCDalgo_template_inBus 
-clear elems;
-elems(1) = Simulink.BusElement;
-elems(1).Name = 'simple_signal';
-elems(1).Dimensions = 1;
-elems(1).DimensionsMode = 'Fixed';
-elems(1).DataType = 'single';
-elems(1).SampleTime = -1;
-elems(1).Complexity = 'real';
-elems(1).Min = [];
-elems(1).Max = [];
-elems(1).DocUnits = '';
-elems(1).Description = '';
-
-SCDalgo_template_inBus = Simulink.Bus;
-SCDalgo_template_inBus.HeaderFile = '';
-SCDalgo_template_inBus.Description = '';
-SCDalgo_template_inBus.DataScope = 'Auto';
-SCDalgo_template_inBus.Alignment = -1;
-SCDalgo_template_inBus.Elements = elems;
-clear elems;
diff --git a/algos/SCDalgo_template/SCDalgo_template_loadfp.m b/algos/SCDalgo_template/SCDalgo_template_loadfp.m
deleted file mode 100644
index bcd889550bdd862e7f88a932798c06f813198317..0000000000000000000000000000000000000000
--- a/algos/SCDalgo_template/SCDalgo_template_loadfp.m
+++ /dev/null
@@ -1,6 +0,0 @@
-function fp = SCDalgo_template_loadfp(obj)
-
-%% Load other fixed parameters
-fp.timing = obj.gettiming;
-fp.refmodel.offset = 1; % a fixed parameter
-end
\ No newline at end of file
diff --git a/algos/SCDalgo_template/SCDalgo_template_loadtp.m b/algos/SCDalgo_template/SCDalgo_template_loadtp.m
deleted file mode 100644
index 74aa12bf3b0ff81dfe7224508a5e508a2aba704c..0000000000000000000000000000000000000000
--- a/algos/SCDalgo_template/SCDalgo_template_loadtp.m
+++ /dev/null
@@ -1,6 +0,0 @@
-function TP = SCDalgo_template_loadtp()
-% Setup tunable control params
-
-TP.gain = single(2);
-TP.refmodel.gain = 4; % another gain used in referenced model
-end
diff --git a/algos/SCDalgo_template/SCDalgo_template_outBus_def.m b/algos/SCDalgo_template/SCDalgo_template_outBus_def.m
deleted file mode 100644
index d0671ae67a3fb86e825722a6466898532343d9ca..0000000000000000000000000000000000000000
--- a/algos/SCDalgo_template/SCDalgo_template_outBus_def.m
+++ /dev/null
@@ -1,21 +0,0 @@
-% Bus object: SCDalgo_template_outBus 
-clear elems;
-elems(1) = Simulink.BusElement;
-elems(1).Name = 'signal';
-elems(1).Dimensions = 1;
-elems(1).DimensionsMode = 'Fixed';
-elems(1).DataType = 'single';
-elems(1).SampleTime = -1;
-elems(1).Complexity = 'real';
-elems(1).Min = [];
-elems(1).Max = [];
-elems(1).DocUnits = '';
-elems(1).Description = '';
-
-SCDalgo_template_outBus = Simulink.Bus;
-SCDalgo_template_outBus.HeaderFile = '';
-SCDalgo_template_outBus.Description = '';
-SCDalgo_template_outBus.DataScope = 'Auto';
-SCDalgo_template_outBus.Alignment = -1;
-SCDalgo_template_outBus.Elements = elems;
-clear elems;
diff --git a/algos/SCDalgo_template/SCDalgo_template_signal_buses.m b/algos/SCDalgo_template/SCDalgo_template_signal_buses.m
deleted file mode 100644
index d5284fc2dd74e10fe0cf20544dcedd2b37fe4fbd..0000000000000000000000000000000000000000
--- a/algos/SCDalgo_template/SCDalgo_template_signal_buses.m
+++ /dev/null
@@ -1,47 +0,0 @@
-function [busNames,Buses] = SCDalgo_template_signal_buses()
-% [busNames,Buses] = SCDalgo_template_signal_buses()
-% Define some buses needed for the template
-
-%% Define signal buses for various SCDsignal types
-% Data examples for which to create buses
-D = {...
-  ones(11,1,'single'),...
-  ones(3,3,'single'),...
-  int32(1)};
-
-% Create buses for these signals and add them to the list
-[Buses,busNames] = deal(cell(numel(D),1)); % init
-for ii = 1:numel(D)
-  mydata = D{ii};
-  mysig = SCDsignal(mydata); % create SCDsignal object for this data example
-  mybus = mysig.createBus; % create Bus for this signal using object method
-  % Store
-  Buses{ii} = mybus;
-  busNames{ii} = mybus.Description;
-end
-
-%% Add output structure: a bus that includes only SCDsignal data types
-
-% First add 3 busElements for the three signals defined above
-for ii=1:3
-elems(ii) = Simulink.BusElement;
-elems(ii).Name = sprintf('SCDsignal_example_%d',ii);
-elems(ii).Dimensions = 1;
-elems(ii).DimensionsMode = 'Fixed';
-elems(ii).DataType = sprintf('Bus: %s',busNames{ii});
-end
-
-% Define output bus with these elements
-outBus = Simulink.Bus;
-outBus.HeaderFile = '';
-outBus.Description = '';
-outBus.DataScope = 'Auto';
-outBus.Alignment = -1;
-outBus.Elements = elems;
-clear elems;
-
-% append to list
-busNames{end+1} = 'SCDalgo_template_outBus';
-Buses{end+1}    = outBus; 
-
-end
diff --git a/algos/SCDalgo_template/SCDalgo_template_test.m b/algos/SCDalgo_template/SCDalgo_template_test.m
deleted file mode 100644
index bf6edcf3069b556c49d234aa19b286789b510abb..0000000000000000000000000000000000000000
--- a/algos/SCDalgo_template/SCDalgo_template_test.m
+++ /dev/null
@@ -1,7 +0,0 @@
-classdef SCDalgo_template_test < SCDalgo_test
-  
-  properties
-    algoobj = SCDalgoobj_template();
-  end
-  
-end
\ No newline at end of file
diff --git a/algos/SCDalgo_template/SCDsignal_tester.cfg b/algos/SCDalgo_template/SCDsignal_tester.cfg
deleted file mode 100644
index 2bc2061acbd9978a3b92ec38036ebfe00e5dfef1..0000000000000000000000000000000000000000
--- a/algos/SCDalgo_template/SCDsignal_tester.cfg
+++ /dev/null
@@ -1,129 +0,0 @@
-
-+MDSParameters = {
- Class=MDSObjLoader
- Shot=-1
-/*
- +Connection_tcvdata_tcv_shot_vista = {
-  Class=MDSObjConnection
-  Server=tcvdata.epfl.ch
-  Tree=tcv_shot
-  +SCDnode02_tp-ADCgains-RVLOOP_gains                 = { Class=MDSParVector                   Path="mag_live_gains('RVLOOP','GAIN')"        }
- }
-*/
- +Connection_spcpc171 = {
-  Class=MDSObjConnection
-  Server=spcpc171.epfl.ch
-  Tree=martetest
-  Shot=1
-  +testenum                 			      = { Class=MDSParEnum                     Path="ENUM1" EnumCode = {0,1,2,3} EnumVal = {"ZHHFS","ZHLFS","Z0HFS","Z0LFS"}        }
- }
-}
-
-
-$TestApp = {
-    Class = RealTimeApplication
-    +Functions = {
-        Class = ReferenceContainer
-        +GAMTimer = {
-            Class = IOGAM
-            InputSignals = {
-                Counter = 	{ 				DataSource = Timer Type = uint32 }                
-                Time 	= 	{ Frequency = 1 DataSource = Timer Type = uint32 }
-            }
-            OutputSignals = {
-                Counter = {                 DataSource = DDB1  Type = uint32 }                
-                Time = {                	DataSource = DDB1  Type = uint32 }            
-            }
-        }
-	    +Constants = {
-	     Class = ConstantGAM
-	     OutputSignals = {
-				it	= { DataSource = DDB1 Type = int32  NumberOfElements = 1   NumberOfDimensions=1 }
-				time	= { DataSource = DDB1 Type = float32  NumberOfElements = 1   NumberOfDimensions=1 }
-				data	= { DataSource = DDB1 Type = int16  NumberOfElements = 528   NumberOfDimensions=1 }				
-				realtime	= { DataSource = DDB1 Type = float32  NumberOfElements = 1   NumberOfDimensions=1 }
-				input	= { DataSource = DDB1 Type = float32  NumberOfElements = 1   NumberOfDimensions=1 Default={1.5} }
-
-
-	     }
-	    }
-		+GAMSimulink1 = {
- 			Class = SimulinkWrapperGAM
-			Library = "/root/SCDalgo_template.so"
-			SymbolPrefix = "SCDalgo_template"
-			
-			Verbosity = 2
-			TunParSourceGAM = MDSParameters
-			SkipNotOkTunParams = 1
-			InputSignals = {		
-				realtime	= { DataSource = DDB1 Type = float32  NumberOfElements = 1   NumberOfDimensions=1 }
-				input	= { DataSource = DDB1 Type = float32  NumberOfElements = 1   NumberOfDimensions=1 }
- 			}
- 			OutputSignals = { 
-				output	= { DataSource = DDB1 Type = uint8  NumberOfElements = 96   NumberOfDimensions=1 }		
- 			}
-		}
-		+LoggerBroker = {
-		 Class = IOGAM
-		 InputSignals = {
-		 	output1  = 	    { DataSource = DDB1 Type = uint8  NumberOfElements = 96 Ranges={{0,3}}   Alias=output }
-		 	output11  = 	    { DataSource = DDB1 Type = uint8  NumberOfElements = 96 Ranges={{40,43}} Alias=output }
-		 	qtag1  = 	    { DataSource = DDB1 Type = uint8  NumberOfElements = 96 Ranges={{44,44}} Alias=output }
-		 	pstate1  = 	    { DataSource = DDB1 Type = uint8  NumberOfElements = 96 Ranges={{45,45}} Alias=output }
-		 	outputint  = 	    { DataSource = DDB1 Type = uint8  NumberOfElements = 96 Ranges={{88,91}} Alias=output }
-		 	qtag3  = 	    { DataSource = DDB1 Type = uint8  NumberOfElements = 96 Ranges={{92,92}} Alias=output }
-		 	pstate3  = 	    { DataSource = DDB1 Type = uint8  NumberOfElements = 96 Ranges={{93,93}} Alias=output }
-		 }
-		 OutputSignals =
-		 {
-            output1= 		{ DataSource = LoggerDataSource Type = float32 }
-            output11= 		{ DataSource = LoggerDataSource Type = float32 }
-            qtag1= 		{ DataSource = LoggerDataSource Type = int8 }
-            pstate1= 		{ DataSource = LoggerDataSource Type = int8 }
-
-            outputint= 		{ DataSource = LoggerDataSource Type = int32 }
-            qtag3= 		{ DataSource = LoggerDataSource Type = int8 }
-            pstate3= 		{ DataSource = LoggerDataSource Type = int8 }
-
-		 }
-		} 
-    }
-    +Data = {
-        Class = ReferenceContainer
-        DefaultDataSource = DDB1
-        +DDB1 = { Class = GAMDataSource }                
-        +LoggerDataSource = { Class = LoggerDataSource }
-        +Timings = { Class = TimingDataSource }
-        +Timer = {
-            Class = LinuxTimer
-            SleepNature = "Default"
-            Signals = {
-                Counter = { Type = uint32 }
-                Time = { Type = uint32 }
-            }
-        }        
-    }
-    +States = {
-        Class = ReferenceContainer
-        +Run = {
-            Class = RealTimeState
-            +Threads = {
-                Class = ReferenceContainer
-                +Thread1 = {
-                    Class = RealTimeThread 
-                    CPUs = 0x1 
-                    Functions = {
-                      GAMTimer                         	      
-                      Constants
-                      GAMSimulink1
-                      LoggerBroker
-                    }
-                }
-            }
-        }        
-    }
-    +Scheduler = {
-        Class = GAMScheduler
-        TimingDataSource = Timings
-    }
-}
diff --git a/algos/SCDalgo_template/referenced_model_example.slx b/algos/SCDalgo_template/referenced_model_example.slx
deleted file mode 100644
index 1ca144dd15cbb88b4e6ae299fa60492d96cf2177..0000000000000000000000000000000000000000
Binary files a/algos/SCDalgo_template/referenced_model_example.slx and /dev/null differ
diff --git a/algos/SCDcalib02/.gitignore b/algos/SCDcalib02/.gitignore
deleted file mode 100644
index 27b8ecde3f5587d757b18322acda03f94558ff64..0000000000000000000000000000000000000000
--- a/algos/SCDcalib02/.gitignore
+++ /dev/null
@@ -1 +0,0 @@
-*.sldd
diff --git a/algos/SCDlih/.gitignore b/algos/SCDlih/.gitignore
deleted file mode 100644
index 27b8ecde3f5587d757b18322acda03f94558ff64..0000000000000000000000000000000000000000
--- a/algos/SCDlih/.gitignore
+++ /dev/null
@@ -1 +0,0 @@
-*.sldd
diff --git a/algos/SCDliuqe/.gitignore b/algos/SCDliuqe/.gitignore
deleted file mode 100644
index 27b8ecde3f5587d757b18322acda03f94558ff64..0000000000000000000000000000000000000000
--- a/algos/SCDliuqe/.gitignore
+++ /dev/null
@@ -1 +0,0 @@
-*.sldd
diff --git a/algos/SCDliuqe/SCDalgo_liuqe_test.m b/algos/SCDliuqe/SCDalgo_liuqe_test.m
deleted file mode 100644
index 855a49e938671b6a6018aa476dfefd2239ec8c40..0000000000000000000000000000000000000000
--- a/algos/SCDliuqe/SCDalgo_liuqe_test.m
+++ /dev/null
@@ -1,7 +0,0 @@
-classdef SCDalgo_liuqe_test < SCDalgo_test
-  
-  properties
-    algoobj = SCDalgoobj_liuqe();
-  end
-  
-end
\ No newline at end of file