# yaml-language-server: $schema=gitlab-ci # yaml-language-server: $format.enable=false stages: - environment - compilers - concretize - install - deploy workflow: rules: - if: $CI_PIPELINE_SOURCE == "merge_request_event" - if: $CI_COMMIT_BRANCH && $CI_OPEN_MERGE_REQUESTS when: never - if: $CI_COMMIT_BRANCH == $CI_DEFAULT_BRANCH - if: $CI_COMMIT_TAG =~ /^v[0-9].*$/ variables: TERM: ansi CI_DATA_LT: "/work/scitas-ge/richart/ci" CI_DATA_ST: "/scratch/richart/ci" .parallel_definition: parallel: matrix: # - environment: [helvetios] # slurm_options: ["-c 36"] # stack: ["pinot-noir"] # app_image: ["registry.c4science.ch/scitas-stack/rhel9-kuma"] # - environment: [izar] # slurm_options: ['-c 40 --gpus 2'] # apptainer_options: ['-nv'] # stack: ["pinot-noir"] # - environment: [jed] # slurm_options: ["-c 72 -p jed -q jed"] # stack: ["pinot-noir"] # app_image: ["registry.c4science.ch/scitas-stack/rhel9-kuma"] - environment: [kuma-h100] slurm_options: ["-c 64"] stack: ["pinot-noir"] apptainer_options: ['--nv'] app_image: ["registry.c4science.ch/scitas-stack/rhel9-kuma"] - environment: [kuma-l40s] slurm_options: ["-c 64"] stack: ["pinot-noir"] apptainer_options: ['--nv'] app_image: ["registry.c4science.ch/scitas-stack/rhel9-kuma"] tags: - ${environment} - stack variables: environment: ${environment} image: ${app_image} # ------------------------------------------------------------------------------ # ------------------------------------------------------------------------------ .squashfs_var: rules: - if: $CI_PIPELINE_SOURCE == "merge_request_event" variables: SQUASHFS_ID: ${CI_MERGE_REQUEST_IID} - if: $CI_COMMIT_BRANCH == $CI_DEFAULT_BRANCH variables: SQUASHFS_ID: ${CI_COMMIT_BRANCH} .parallel_job: extends: - .parallel_definition - .squashfs_var variables: MOUNT_POINT: $(jq -Mrc .stack.mount_point ${CI_PROJECT_DIR}/stacks/${stack}/config.json) FAKEHOME: "/scratch/$(id -un)" COMMAND_OPTIONS_SBATCH: ${slurm_options} STACK_VERSION: $(jq -Mrc .stack.version ${CI_PROJECT_DIR}/stacks/${stack}/config.json) image_name: ${stack}-${environment}-${SQUASHFS_ID}-${CI_PIPELINE_ID} squashfs_image: $(ls -t1 ${CI_DATA_LT}/squashfs-cache/${image_name}*.sqfs 2> /dev/null | head -1) APPTAINER_EXEC_OPTIONS: >- ${apptainer_options} --cleanenv -H $(mktemp -d -p ${FAKEHOME}/):/home/$(id -un) --env PYTHONUNBUFFERED=1 --bind ${CI_DATA_LT}/buildcache:${MOUNT_POINT}/buildcache --bind ${CI_DATA_LT}/spack-mirror:${MOUNT_POINT}/spack-mirror --bind ${CI_DATA_ST}/squashfs-cache/:/squashfs-cache --bind ${CI_DATA_ST}/overlayfs:/overlayfs --fusemount "host:${CI_PROJECT_DIR}/ci/squashfuse_ll.sh ${CI_DATA_ST} ${image_name} ${squashfs_image} /overlayfs/lower-${image_name}" --fusemount "container:${CI_PROJECT_DIR}/ci/fuse-overlayfs.sh ${image_name} ${MOUNT_POINT}/${stack}/${environment}/${STACK_VERSION}" .spack_cache: cache: key: ${stack}-${environment}-spack-cache policy: pull-push paths: - ${stack} # ------------------------------------------------------------------------------ # ------------------------------------------------------------------------------ spack:checkout: stage: .pre variables: APPTAINER_EXEC_OPTIONS: >- --cleanenv --bind ${CI_DATA_LT} --bind ${CI_DATA_ST} --bind ${CI_DATA_LT}/squashfs-cache:/squashfs-cache extends: - .parallel_definition before_script: - git config --global --add --bool advice.detachedHead false script: - ./ci/prepare_squashfs.sh timeout: 1h spack:setup: stage: environment extends: - .parallel_job #- .spack_cache script: - ci/setup_spack.sh - ${CI_PROJECT_DIR}/ci/update_squashfs.sh needs: - job: spack:checkout spack:install_compilers: stage: compilers extends: - .parallel_job #- .spack_cache script: - ci/install_compilers.sh - source ci/stack_env.sh - ${STACK_LOCATION}/spack/bin/spack --color always -e ${environment} config blame compilers - ${CI_PROJECT_DIR}/ci/update_squashfs.sh artifacts: reports: junit: spack-install-*.xml needs: - job: spack:setup timeout: 5h spack:concretize: stage: concretize extends: - .parallel_job #- .spack_cache script: - source ci/stack_env.sh - ${STACK_LOCATION}/spack/bin/spack -e ${environment} config blame | tee config-${environment}-${stack}.log - ${STACK_LOCATION}/spack/bin/spack --color always -e ${environment} concretize | tee concretize-${environment}-${stack}.log - ${STACK_LOCATION}/spack/bin/spack --color always -e ${environment} mirror create -D -d ${MOUNT_POINT}/spack-mirror -a || /usr//bin/true - cp ${SPACK_SYSTEM_CONFIG_PATH}/spack.lock spack-${environment}-${stack}.lock - ${CI_PROJECT_DIR}/ci/update_squashfs.sh artifacts: paths: - config-*.log - concretize-*.log - spack-*.lock needs: - job: spack:install_compilers timeout: 24h spack:install: stage: install extends: - .parallel_job #- .spack_cache script: - source ci/stack_env.sh # Cleaning patches in case one has a different hash - ${STACK_LOCATION}/spack/bin/spack --color always -e ${environment} clean -m - ${STACK_LOCATION}/spack/bin/spack --color always -e ${environment} install --log-file ${CI_PROJECT_DIR}/spack-install-${environment}.xml --log-format junit --only-concrete --fail-fast --show-log-on-error - ${STACK_LOCATION}/spack/bin/spack --color always -e ${environment} find -vl | tee spack-find-${environment}-${stack}.log - ${STACK_LOCATION}/spack/bin/spack --color always -e ${environment} buildcache create --update-index --key EDC904DCE3D2E84E ${MOUNT_POINT}/buildcache - ${STACK_LOCATION}/spack/bin/spack -e ${environment} module lmod refresh --yes | tee spack-modules-${environment}-${stack}.log - ${CI_PROJECT_DIR}/ci/update_squashfs.sh needs: - job: spack:concretize artifacts: paths: - spack-*.log - spack-*.xml reports: junit: spack-install-*.xml timeout: 72h spack:mksquashfs: stage: deploy extends: - .parallel_job #- .spack_cache script: - source ci/stack_env.sh - mkfir -p /squashfs-cache/releases/ - mksquashfs ${STACK_LOCATION} /squashfs-cache/releases/${stack}-${environment}-${SQUASHFS_ID}-${CI_COMMIT_TAG}.sqfs needs: - job: spack:install timeout: 1h rules: - if: $CI_COMMIT_TAG && $CI_COMMIT_TAG =~ /v[0-9]+.*/